Protein–RNA interactions for Protein: Q9QY53

Nphp1, Nephrocystin-1, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp1Q9QY53 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nphp1Q9QY53 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.44□□□□□ -0.1
Nphp1Q9QY53 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nphp1Q9QY53 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nphp1Q9QY53 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.44□□□□□ -0.1
Nphp1Q9QY53 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Gm7851-201ENSMUST00000117574 323 ntBASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.43□□□□□ -0.1
Nphp1Q9QY53 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.43□□□□□ -0.1
Nphp1Q9QY53 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Gm24891-201ENSMUST00000104391 136 ntBASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Gm19208-201ENSMUST00000213861 912 ntBASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.42□□□□□ -0.1
Nphp1Q9QY53 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Gm12579-201ENSMUST00000118040 783 ntBASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Gm13263-201ENSMUST00000121271 838 ntBASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Gm38151-201ENSMUST00000195085 289 ntBASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.41□□□□□ -0.1
Nphp1Q9QY53 Gm18065-201ENSMUST00000221395 526 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms