Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trem1Q9JKE2 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Parp10-201ENSMUST00000075689 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Gm5687-201ENSMUST00000118252 640 ntBASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Gm14760-201ENSMUST00000121831 999 ntBASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Gm44397-201ENSMUST00000195950 113 ntBASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Syt7-204ENSMUST00000223586 1344 ntBASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Acad10-202ENSMUST00000111770 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Mroh3-205ENSMUST00000212798 2933 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trem1Q9JKE2 Il20rb-201ENSMUST00000098458 2793 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Cpt1b-201ENSMUST00000109313 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Gm12341-201ENSMUST00000119724 503 ntBASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Gm14704-201ENSMUST00000120300 874 ntBASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trem1Q9JKE2 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms