Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4bQ9D8B3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chmp4bQ9D8B3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4bQ9D8B3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Chmp4bQ9D8B3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4bQ9D8B3 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Chmp4bQ9D8B3 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.82□□□□□ -0.04
Chmp4bQ9D8B3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4bQ9D8B3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4bQ9D8B3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4bQ9D8B3 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
Chmp4bQ9D8B3 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Gm28937-201ENSMUST00000185413 695 ntBASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Gm29400-201ENSMUST00000187208 695 ntBASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Gm28662-201ENSMUST00000188446 695 ntBASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Gm28251-201ENSMUST00000188835 695 ntBASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Gm37318-201ENSMUST00000194325 695 ntBASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Gm38017-201ENSMUST00000194768 695 ntBASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Gm37287-201ENSMUST00000195449 695 ntBASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Gm37793-201ENSMUST00000195548 695 ntBASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Gm1840-201ENSMUST00000051687 1432 ntBASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chmp4bQ9D8B3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 AC127597.1-201ENSMUST00000225697 5711 ntBASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Gm26083-201ENSMUST00000157904 193 ntBASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Gm38117-201ENSMUST00000194653 939 ntBASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Gm9797-202ENSMUST00000218003 294 ntBASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Gm8420-201ENSMUST00000097103 598 ntBASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4bQ9D8B3 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4bQ9D8B3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4bQ9D8B3 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4bQ9D8B3 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp4bQ9D8B3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.79□□□□□ -0.04
Chmp4bQ9D8B3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Chmp4bQ9D8B3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.79□□□□□ -0.04
Chmp4bQ9D8B3 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms