Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
U2af1Q9D883 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
U2af1Q9D883 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
U2af1Q9D883 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
U2af1Q9D883 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
U2af1Q9D883 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
U2af1Q9D883 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Gm38194-201ENSMUST00000194529 2211 ntBASIC15.42■□□□□ 0.06
U2af1Q9D883 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.42■□□□□ 0.06
U2af1Q9D883 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC15.42■□□□□ 0.06
U2af1Q9D883 Gm22334-201ENSMUST00000158070 133 ntBASIC15.42■□□□□ 0.06
U2af1Q9D883 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Gm18367-201ENSMUST00000176139 600 ntBASIC15.42■□□□□ 0.06
U2af1Q9D883 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC15.42■□□□□ 0.06
U2af1Q9D883 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC15.42■□□□□ 0.06
U2af1Q9D883 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC15.42■□□□□ 0.06
U2af1Q9D883 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC15.42■□□□□ 0.06
U2af1Q9D883 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC15.42■□□□□ 0.06
U2af1Q9D883 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC15.42■□□□□ 0.06
U2af1Q9D883 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
U2af1Q9D883 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
U2af1Q9D883 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
U2af1Q9D883 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
U2af1Q9D883 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
U2af1Q9D883 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC15.41■□□□□ 0.06
U2af1Q9D883 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC15.41■□□□□ 0.06
U2af1Q9D883 Gm43172-201ENSMUST00000202139 2137 ntBASIC15.41■□□□□ 0.06
U2af1Q9D883 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
U2af1Q9D883 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
U2af1Q9D883 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
U2af1Q9D883 Gm45743-201ENSMUST00000212701 2795 ntBASIC15.41■□□□□ 0.06
U2af1Q9D883 Gm15352-201ENSMUST00000118696 270 ntBASIC15.41■□□□□ 0.06
U2af1Q9D883 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.41■□□□□ 0.06
U2af1Q9D883 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
U2af1Q9D883 Gm13328-201ENSMUST00000120816 1020 ntBASIC15.41■□□□□ 0.06
U2af1Q9D883 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC15.41■□□□□ 0.06
U2af1Q9D883 Gm12407-201ENSMUST00000180219 324 ntBASIC15.41■□□□□ 0.06
U2af1Q9D883 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
U2af1Q9D883 Gm6108-201ENSMUST00000208365 367 ntBASIC15.41■□□□□ 0.06
U2af1Q9D883 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.41■□□□□ 0.06
U2af1Q9D883 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
U2af1Q9D883 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
U2af1Q9D883 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
U2af1Q9D883 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
U2af1Q9D883 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
U2af1Q9D883 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
U2af1Q9D883 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
U2af1Q9D883 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.41■□□□□ 0.06
U2af1Q9D883 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
U2af1Q9D883 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
U2af1Q9D883 Gm9387-201ENSMUST00000098624 1320 ntBASIC15.41■□□□□ 0.06
U2af1Q9D883 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
U2af1Q9D883 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
U2af1Q9D883 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
U2af1Q9D883 CT009489.1-201ENSMUST00000227740 1893 ntBASIC15.4■□□□□ 0.06
U2af1Q9D883 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
U2af1Q9D883 Gm22711-201ENSMUST00000116890 133 ntBASIC15.4■□□□□ 0.06
U2af1Q9D883 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Gm9550-201ENSMUST00000161130 862 ntBASIC15.4■□□□□ 0.06
U2af1Q9D883 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.4■□□□□ 0.06
U2af1Q9D883 Gm45770-201ENSMUST00000212105 616 ntBASIC15.4■□□□□ 0.06
U2af1Q9D883 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
U2af1Q9D883 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
U2af1Q9D883 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
U2af1Q9D883 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms