Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cfap53Q9D439 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.92□□□□□ -0.34
Cfap53Q9D439 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Gm5616-201ENSMUST00000165252 384 ntBASIC12.92□□□□□ -0.34
Cfap53Q9D439 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Gm8741-201ENSMUST00000174736 384 ntBASIC12.92□□□□□ -0.34
Cfap53Q9D439 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.92□□□□□ -0.34
Cfap53Q9D439 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.92□□□□□ -0.34
Cfap53Q9D439 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.92□□□□□ -0.34
Cfap53Q9D439 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Gm45433-201ENSMUST00000209386 247 ntBASIC12.92□□□□□ -0.34
Cfap53Q9D439 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Gm4157-201ENSMUST00000211647 679 ntBASIC12.92□□□□□ -0.34
Cfap53Q9D439 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cfap53Q9D439 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.91□□□□□ -0.34
Cfap53Q9D439 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Gm15004-201ENSMUST00000119192 630 ntBASIC12.91□□□□□ -0.34
Cfap53Q9D439 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cfap53Q9D439 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cfap53Q9D439 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms