Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Gm12439-201ENSMUST00000117162 365 ntBASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Gm14928-201ENSMUST00000120198 477 ntBASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Gm4271-201ENSMUST00000174444 973 ntBASIC11.82□□□□□ -0.52
Trim42Q9D2H5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Gm5706-201ENSMUST00000181525 993 ntBASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Gm7430-201ENSMUST00000193824 1144 ntBASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Gm10012-201ENSMUST00000078252 192 ntBASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trim42Q9D2H5 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Gm8515-201ENSMUST00000194852 576 ntBASIC11.81□□□□□ -0.52
Trim42Q9D2H5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Gm17794-201ENSMUST00000220252 955 ntBASIC11.81□□□□□ -0.52
Trim42Q9D2H5 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Gm22058-201ENSMUST00000083393 310 ntBASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim42Q9D2H5 AC154352.1-201ENSMUST00000221477 2365 ntBASIC11.81□□□□□ -0.52
Trim42Q9D2H5 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Gm12091-201ENSMUST00000146791 830 ntBASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim42Q9D2H5 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms