Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snf8Q9CZ28 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Snf8Q9CZ28 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Snf8Q9CZ28 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Gm11989-201ENSMUST00000117240 672 ntBASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Gm11362-201ENSMUST00000118838 850 ntBASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Gm8062-201ENSMUST00000139696 444 ntBASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Gm43133-201ENSMUST00000197472 463 ntBASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Gm45880-201ENSMUST00000213041 853 ntBASIC12.08□□□□□ -0.48
Snf8Q9CZ28 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.08□□□□□ -0.48
Snf8Q9CZ28 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Snf8Q9CZ28 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Gm38002-201ENSMUST00000193255 180 ntBASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Gm19287-201ENSMUST00000203190 358 ntBASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Snf8Q9CZ28 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.06□□□□□ -0.48
Snf8Q9CZ28 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms