Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Gm14127-201ENSMUST00000117906 678 ntBASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Gm14999-201ENSMUST00000121039 624 ntBASIC10.87□□□□□ -0.67
Trim13Q9CYB0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.87□□□□□ -0.67
Trim13Q9CYB0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Gm18711-201ENSMUST00000199341 750 ntBASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Gm45878-201ENSMUST00000211839 241 ntBASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim13Q9CYB0 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Gm13570-201ENSMUST00000140763 309 ntBASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Gm18062-201ENSMUST00000208020 547 ntBASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Gm18055-201ENSMUST00000208254 547 ntBASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim13Q9CYB0 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.85□□□□□ -0.67
Trim13Q9CYB0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Gm14247-201ENSMUST00000120950 237 ntBASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Gm7809-201ENSMUST00000153199 742 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms