Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ssu72Q9CY97 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Ssu72Q9CY97 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ssu72Q9CY97 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Ssu72Q9CY97 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ssu72Q9CY97 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Gm12390-201ENSMUST00000117897 397 ntBASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Gm11500-201ENSMUST00000118237 601 ntBASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Gm5950-201ENSMUST00000213337 772 ntBASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ssu72Q9CY97 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.63□□□□□ -0.55
Ssu72Q9CY97 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms