Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Gm18062-201ENSMUST00000208020 547 ntBASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Gm18055-201ENSMUST00000208254 547 ntBASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ssr1Q9CY50 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Gm8062-201ENSMUST00000139696 444 ntBASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Rprl1-201ENSMUST00000158050 327 ntBASIC12.81□□□□□ -0.36
Ssr1Q9CY50 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Gm43118-201ENSMUST00000199149 775 ntBASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Gm18164-201ENSMUST00000213769 927 ntBASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Gm18166-201ENSMUST00000215557 927 ntBASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.81□□□□□ -0.36
Ssr1Q9CY50 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ssr1Q9CY50 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssr1Q9CY50 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.8□□□□□ -0.36
Ssr1Q9CY50 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ssr1Q9CY50 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssr1Q9CY50 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.8□□□□□ -0.36
Ssr1Q9CY50 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ssr1Q9CY50 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms