Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sec61bQ9CQS8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sec61bQ9CQS8 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sec61bQ9CQS8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC6.58□□□□□ -1.36
Sec61bQ9CQS8 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sec61bQ9CQS8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sec61bQ9CQS8 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
Sec61bQ9CQS8 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Sec61bQ9CQS8 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sec61bQ9CQS8 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.58□□□□□ -1.36
Sec61bQ9CQS8 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sec61bQ9CQS8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sec61bQ9CQS8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sec61bQ9CQS8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm45003-201ENSMUST00000205875 2158 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm21939-201ENSMUST00000221137 2773 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm23949-201ENSMUST00000104027 127 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm12073-201ENSMUST00000117382 524 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm12501-201ENSMUST00000119163 529 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm22334-201ENSMUST00000158070 133 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm25732-201ENSMUST00000175168 60 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm6590-201ENSMUST00000203343 687 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm43962-201ENSMUST00000203898 190 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm10109-202ENSMUST00000206890 1211 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm45224-201ENSMUST00000208203 414 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm29794-201ENSMUST00000218919 1247 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 AC154562.1-201ENSMUST00000226140 966 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 AC131330.1-201ENSMUST00000227814 1015 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61bQ9CQS8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms