Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm22018-201ENSMUST00000104357 131 ntBASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm5187-201ENSMUST00000117317 991 ntBASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm11439-201ENSMUST00000118598 409 ntBASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm28882-201ENSMUST00000185504 314 ntBASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm38002-201ENSMUST00000193255 180 ntBASIC11.12□□□□□ -0.63
Ska1Q9CPV1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ska1Q9CPV1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.11□□□□□ -0.63
Ska1Q9CPV1 Gm5706-201ENSMUST00000181525 993 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms