Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gm14274-201ENSMUST00000117182 615 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gm14892-201ENSMUST00000117636 267 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gm11783-201ENSMUST00000119549 885 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gm11979-201ENSMUST00000119629 743 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gm9089-201ENSMUST00000122027 526 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gm8451-201ENSMUST00000170338 447 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gm7536-201ENSMUST00000077389 444 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gm5453-201ENSMUST00000080866 447 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx6-1Q99MA9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gm12218-201ENSMUST00000117666 399 ntBASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gm42816-201ENSMUST00000198433 325 ntBASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gm43610-201ENSMUST00000199117 365 ntBASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gm45113-201ENSMUST00000207518 165 ntBASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nkx6-1Q99MA9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx6-1Q99MA9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms