Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Clp1Q99LI9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.42□□□□□ -0.42
Clp1Q99LI9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clp1Q99LI9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm14274-201ENSMUST00000117182 615 ntBASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm16219-201ENSMUST00000120096 274 ntBASIC12.41□□□□□ -0.42
Clp1Q99LI9 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Clp1Q99LI9 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.41□□□□□ -0.42
Clp1Q99LI9 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm28923-201ENSMUST00000187755 322 ntBASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm44647-201ENSMUST00000207402 428 ntBASIC12.41□□□□□ -0.42
Clp1Q99LI9 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm5468-202ENSMUST00000227851 682 ntBASIC12.41□□□□□ -0.42
Clp1Q99LI9 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.41□□□□□ -0.42
Clp1Q99LI9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clp1Q99LI9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.4□□□□□ -0.42
Clp1Q99LI9 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.4□□□□□ -0.42
Clp1Q99LI9 Gm11979-201ENSMUST00000119629 743 ntBASIC12.4□□□□□ -0.42
Clp1Q99LI9 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.4□□□□□ -0.42
Clp1Q99LI9 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.4□□□□□ -0.42
Clp1Q99LI9 Gm45359-201ENSMUST00000210635 427 ntBASIC12.4□□□□□ -0.42
Clp1Q99LI9 Mt1-202ENSMUST00000211807 1085 ntBASIC12.4□□□□□ -0.42
Clp1Q99LI9 Gm6390-201ENSMUST00000215034 589 ntBASIC12.4□□□□□ -0.42
Clp1Q99LI9 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Clp1Q99LI9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms