Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Gm5705-201ENSMUST00000066241 711 ntBASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdha3Q91Y16 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Gm9192-201ENSMUST00000183221 985 ntBASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdha3Q91Y16 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Gm2553-201ENSMUST00000215986 605 ntBASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Gm807-202ENSMUST00000224929 408 ntBASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdha3Q91Y16 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms