Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Mir1956-201ENSMUST00000157748 65 ntBASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Gm43778-201ENSMUST00000199438 199 ntBASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Gm9111-201ENSMUST00000219394 709 ntBASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Mir483-201ENSMUST00000093631 73 ntBASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga6Q91XY2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Gm15352-201ENSMUST00000118696 270 ntBASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Gm18304-201ENSMUST00000189162 546 ntBASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Gm44958-201ENSMUST00000203734 736 ntBASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga6Q91XY2 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhga6Q91XY2 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhga6Q91XY2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Pcdhga6Q91XY2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Pcdhga6Q91XY2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhga6Q91XY2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhga6Q91XY2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms