Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.09□□□□□ -0.63
Clrn1Q8K445 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Gm9192-201ENSMUST00000183221 985 ntBASIC11.09□□□□□ -0.63
Clrn1Q8K445 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clrn1Q8K445 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clrn1Q8K445 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC11.09□□□□□ -0.63
Clrn1Q8K445 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Mir433-201ENSMUST00000093564 124 ntBASIC11.09□□□□□ -0.63
Clrn1Q8K445 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clrn1Q8K445 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Clrn1Q8K445 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Clrn1Q8K445 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.08□□□□□ -0.64
Clrn1Q8K445 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gm11700-201ENSMUST00000119409 403 ntBASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.08□□□□□ -0.64
Clrn1Q8K445 Rps4l-202ENSMUST00000204242 789 ntBASIC11.08□□□□□ -0.64
Clrn1Q8K445 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gm270-201ENSMUST00000223010 976 ntBASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.08□□□□□ -0.64
Clrn1Q8K445 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clrn1Q8K445 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Clrn1Q8K445 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.07□□□□□ -0.64
Clrn1Q8K445 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Clrn1Q8K445 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms