Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gm37793-201ENSMUST00000195548 695 ntBASIC11.5□□□□□ -0.57
Rab43Q8CG50 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.5□□□□□ -0.57
Rab43Q8CG50 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rab43Q8CG50 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.49□□□□□ -0.57
Rab43Q8CG50 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Gm14942-201ENSMUST00000119642 336 ntBASIC11.49□□□□□ -0.57
Rab43Q8CG50 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.49□□□□□ -0.57
Rab43Q8CG50 Gm37981-201ENSMUST00000194280 535 ntBASIC11.49□□□□□ -0.57
Rab43Q8CG50 Gm42657-201ENSMUST00000201746 211 ntBASIC11.49□□□□□ -0.57
Rab43Q8CG50 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.49□□□□□ -0.57
Rab43Q8CG50 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.49□□□□□ -0.57
Rab43Q8CG50 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rab43Q8CG50 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab43Q8CG50 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab43Q8CG50 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab43Q8CG50 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rab43Q8CG50 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab43Q8CG50 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab43Q8CG50 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab43Q8CG50 Gm12036-201ENSMUST00000120008 530 ntBASIC11.48□□□□□ -0.57
Rab43Q8CG50 Gm9089-201ENSMUST00000122027 526 ntBASIC11.48□□□□□ -0.57
Rab43Q8CG50 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.48□□□□□ -0.57
Rab43Q8CG50 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.48□□□□□ -0.57
Rab43Q8CG50 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.48□□□□□ -0.57
Rab43Q8CG50 Mir1956-201ENSMUST00000157748 65 ntBASIC11.48□□□□□ -0.57
Rab43Q8CG50 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.48□□□□□ -0.57
Rab43Q8CG50 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rab43Q8CG50 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rab43Q8CG50 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.48□□□□□ -0.57
Rab43Q8CG50 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab43Q8CG50 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.48□□□□□ -0.57
Rab43Q8CG50 Gm9136-201ENSMUST00000193368 454 ntBASIC11.48□□□□□ -0.57
Rab43Q8CG50 Gm37028-201ENSMUST00000194276 107 ntBASIC11.48□□□□□ -0.57
Rab43Q8CG50 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab43Q8CG50 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rab43Q8CG50 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.48□□□□□ -0.57
Rab43Q8CG50 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms