Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trerf1Q8BXJ2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Gm44967-201ENSMUST00000207047 631 ntBASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Gm9996-201ENSMUST00000070359 913 ntBASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trerf1Q8BXJ2 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Gm43014-201ENSMUST00000198568 2443 ntBASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Gm13665-201ENSMUST00000120830 528 ntBASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms