Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nup54Q8BTS4 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nup54Q8BTS4 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Gm15432-201ENSMUST00000121106 195 ntBASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Gm7666-201ENSMUST00000146631 819 ntBASIC12.02□□□□□ -0.49
Nup54Q8BTS4 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Gm8459-201ENSMUST00000162504 760 ntBASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.02□□□□□ -0.49
Nup54Q8BTS4 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.02□□□□□ -0.49
Nup54Q8BTS4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nup54Q8BTS4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Gm22920-201ENSMUST00000102175 109 ntBASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Gm3150-201ENSMUST00000166418 204 ntBASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Mir7686-201ENSMUST00000200604 57 ntBASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms