Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Gm17812-201ENSMUST00000204935 318 ntBASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Gm45433-201ENSMUST00000209386 247 ntBASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Gm5363-201ENSMUST00000211927 938 ntBASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cpsf4Q8BQZ5 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Cpsf4Q8BQZ5 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cpsf4Q8BQZ5 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cpsf4Q8BQZ5 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cpsf4Q8BQZ5 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Cpsf4Q8BQZ5 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gm14277-201ENSMUST00000121195 360 ntBASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4Q8BQZ5 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms