Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.05□□□□□ -0.48
Sfr1Q8BP27 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Gm26448-201ENSMUST00000082446 203 ntBASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sfr1Q8BP27 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Gm17040-202ENSMUST00000170597 889 ntBASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Gm19287-201ENSMUST00000203190 358 ntBASIC12.04□□□□□ -0.48
Sfr1Q8BP27 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.04□□□□□ -0.48
Sfr1Q8BP27 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.04□□□□□ -0.48
Sfr1Q8BP27 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sfr1Q8BP27 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.03□□□□□ -0.48
Sfr1Q8BP27 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms