Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm11475-201ENSMUST00000118482 476 ntBASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gm16459-201ENSMUST00000121443 686 ntBASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gm17221-201ENSMUST00000163909 481 ntBASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gm17073-201ENSMUST00000168069 556 ntBASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gm7627-201ENSMUST00000183205 999 ntBASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gm45527-201ENSMUST00000211052 774 ntBASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 AC122024.3-201ENSMUST00000217719 294 ntBASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gm9102-201ENSMUST00000219250 465 ntBASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gm6564-201ENSMUST00000075377 619 ntBASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gm43547-201ENSMUST00000197729 328 ntBASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col16a1Q8BLX7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
Col16a1Q8BLX7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Nudt13-207ENSMUST00000224311 1574 ntBASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Gm44573-201ENSMUST00000191753 2370 ntBASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Gm19246-201ENSMUST00000173599 255 ntBASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Gm9791-201ENSMUST00000060997 447 ntBASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col16a1Q8BLX7 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Gm15136-201ENSMUST00000120552 533 ntBASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Gm16547-201ENSMUST00000159474 293 ntBASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Gm20781-201ENSMUST00000193154 693 ntBASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Gm21736-201ENSMUST00000195399 693 ntBASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Gm43365-201ENSMUST00000196522 2106 ntBASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Gm18010-201ENSMUST00000203553 202 ntBASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Gm7192-201ENSMUST00000210793 1137 ntBASIC15.13■□□□□ 0.01
Col16a1Q8BLX7 Gm26782-203ENSMUST00000227103 751 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms