Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Gm14892-201ENSMUST00000117636 267 ntBASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Gm11340-201ENSMUST00000119226 412 ntBASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Gm14219-201ENSMUST00000120414 288 ntBASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Gm14441-201ENSMUST00000121960 540 ntBASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcal1Q8BJL0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.54□□□□□ -0.4
Smarcal1Q8BJL0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Smarcal1Q8BJL0 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms