Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Gm19187-201ENSMUST00000206781 892 ntBASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Gm9899-201ENSMUST00000065519 555 ntBASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc40Q8BI79 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Ccdc40Q8BI79 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Gm14109-201ENSMUST00000118814 309 ntBASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Gm27046-201ENSMUST00000182160 463 ntBASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc40Q8BI79 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Gm15610-201ENSMUST00000120584 195 ntBASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Mir8109-201ENSMUST00000184375 117 ntBASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Gm3961-201ENSMUST00000204425 994 ntBASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccdc40Q8BI79 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms