Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim6Q8BGE7 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Gm27731-201ENSMUST00000185192 107 ntBASIC12.49□□□□□ -0.41
Trim6Q8BGE7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim6Q8BGE7 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.48□□□□□ -0.41
Trim6Q8BGE7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Mir1247-201ENSMUST00000116706 82 ntBASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Gm6023-201ENSMUST00000118217 606 ntBASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Gm13316-201ENSMUST00000140537 691 ntBASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Gm17931-201ENSMUST00000208132 634 ntBASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Gm9996-201ENSMUST00000070359 913 ntBASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim6Q8BGE7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim6Q8BGE7 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim6Q8BGE7 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim6Q8BGE7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim6Q8BGE7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim6Q8BGE7 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim6Q8BGE7 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim6Q8BGE7 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim6Q8BGE7 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim6Q8BGE7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim6Q8BGE7 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim6Q8BGE7 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms