Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Gm9369-201ENSMUST00000196009 733 ntBASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Gm45094-201ENSMUST00000207013 617 ntBASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 AC162932.1-201ENSMUST00000219209 872 ntBASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Capsl-202ENSMUST00000226688 739 ntBASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 CT030652.1-201ENSMUST00000227377 1235 ntBASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trnp1Q80ZI1 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Gm11942-201ENSMUST00000180255 345 ntBASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Gm5267-201ENSMUST00000191574 1045 ntBASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Gm37782-201ENSMUST00000194879 678 ntBASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Gm44323-201ENSMUST00000198689 129 ntBASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Gm43854-201ENSMUST00000200418 394 ntBASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Gm45527-201ENSMUST00000211052 774 ntBASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 CT030135.2-201ENSMUST00000225255 893 ntBASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trnp1Q80ZI1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Gm23675-201ENSMUST00000157311 125 ntBASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Gm43547-201ENSMUST00000197729 328 ntBASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trnp1Q80ZI1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms