Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Gm14193-201ENSMUST00000105067 153 ntBASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Gm15352-201ENSMUST00000118696 270 ntBASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Gm9550-201ENSMUST00000161130 862 ntBASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Nphp3Q7TNH6 Cog3-203ENSMUST00000227473 4197 ntBASIC14.27□□□□□ -0.13
Nphp3Q7TNH6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nphp3Q7TNH6 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.27□□□□□ -0.13
Nphp3Q7TNH6 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nphp3Q7TNH6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nphp3Q7TNH6 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nphp3Q7TNH6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nphp3Q7TNH6 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nphp3Q7TNH6 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nphp3Q7TNH6 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nphp3Q7TNH6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.27□□□□□ -0.13
Nphp3Q7TNH6 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nphp3Q7TNH6 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nphp3Q7TNH6 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 n-R5s64-201ENSMUST00000102019 119 ntBASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Gm18367-201ENSMUST00000176139 600 ntBASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Gm12407-201ENSMUST00000180219 324 ntBASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Gm38314-201ENSMUST00000195709 625 ntBASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Gm1840-201ENSMUST00000051687 1432 ntBASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.26□□□□□ -0.13
Nphp3Q7TNH6 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Gm12616-201ENSMUST00000118594 382 ntBASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Gm15573-201ENSMUST00000119487 540 ntBASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Gm10807-201ENSMUST00000177134 795 ntBASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Gm12624-201ENSMUST00000177615 382 ntBASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Gm12621-201ENSMUST00000177760 382 ntBASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Gm12615-201ENSMUST00000177970 382 ntBASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Gm12622-201ENSMUST00000177975 382 ntBASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Gm12627-201ENSMUST00000178412 382 ntBASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Gm12625-201ENSMUST00000179122 382 ntBASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Gm12614-201ENSMUST00000179586 382 ntBASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Gm12613-201ENSMUST00000180323 382 ntBASIC14.25□□□□□ -0.13
Nphp3Q7TNH6 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms