Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm23596-201ENSMUST00000104304 132 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm4909-201ENSMUST00000118749 794 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm15937-201ENSMUST00000120727 1235 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Mir6979-201ENSMUST00000183927 56 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm27427-201ENSMUST00000185134 193 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm3332-201ENSMUST00000189337 928 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm37866-201ENSMUST00000191950 696 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm37024-201ENSMUST00000192224 868 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm18717-201ENSMUST00000192744 1241 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm42997-202ENSMUST00000200321 985 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm43952-201ENSMUST00000203765 751 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm9797-202ENSMUST00000218003 294 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 AC173482.2-201ENSMUST00000224044 750 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gm42478-201ENSMUST00000199252 1467 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scube3Q66PY1 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.56□□□□□ -0.4
Scube3Q66PY1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.55□□□□□ -0.4
Scube3Q66PY1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.55□□□□□ -0.4
Scube3Q66PY1 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Gm9136-201ENSMUST00000193368 454 ntBASIC12.55□□□□□ -0.4
Scube3Q66PY1 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 AU022133-201ENSMUST00000200601 873 ntBASIC12.55□□□□□ -0.4
Scube3Q66PY1 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Gm29787-201ENSMUST00000222129 849 ntBASIC12.55□□□□□ -0.4
Scube3Q66PY1 Gm807-202ENSMUST00000224929 408 ntBASIC12.55□□□□□ -0.4
Scube3Q66PY1 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.55□□□□□ -0.4
Scube3Q66PY1 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.55□□□□□ -0.4
Scube3Q66PY1 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scube3Q66PY1 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scube3Q66PY1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scube3Q66PY1 AC158595.1-201ENSMUST00000217989 1435 ntBASIC12.54□□□□□ -0.4
Scube3Q66PY1 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Scube3Q66PY1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scube3Q66PY1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scube3Q66PY1 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Scube3Q66PY1 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Scube3Q66PY1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms