Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Ctr9Q62018 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ctr9Q62018 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Ctr9Q62018 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.89□□□□□ -0.19
Ctr9Q62018 Gm9540-201ENSMUST00000188230 478 ntBASIC13.89□□□□□ -0.19
Ctr9Q62018 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.89□□□□□ -0.19
Ctr9Q62018 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.89□□□□□ -0.19
Ctr9Q62018 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.89□□□□□ -0.19
Ctr9Q62018 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ctr9Q62018 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.89□□□□□ -0.19
Ctr9Q62018 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Ctr9Q62018 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Ctr9Q62018 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.89□□□□□ -0.19
Ctr9Q62018 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Cog3-203ENSMUST00000227473 4197 ntBASIC13.89□□□□□ -0.19
Ctr9Q62018 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ctr9Q62018 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ctr9Q62018 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ctr9Q62018 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ctr9Q62018 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.88□□□□□ -0.19
Ctr9Q62018 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ctr9Q62018 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.88□□□□□ -0.19
Ctr9Q62018 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Gm22144-201ENSMUST00000157402 102 ntBASIC13.88□□□□□ -0.19
Ctr9Q62018 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.88□□□□□ -0.19
Ctr9Q62018 Gm45113-201ENSMUST00000207518 165 ntBASIC13.88□□□□□ -0.19
Ctr9Q62018 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Ctr9Q62018 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.88□□□□□ -0.19
Ctr9Q62018 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.88□□□□□ -0.19
Ctr9Q62018 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.88□□□□□ -0.19
Ctr9Q62018 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ctr9Q62018 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.88□□□□□ -0.19
Ctr9Q62018 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.88□□□□□ -0.19
Ctr9Q62018 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.88□□□□□ -0.19
Ctr9Q62018 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13.88□□□□□ -0.19
Ctr9Q62018 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ctr9Q62018 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.87□□□□□ -0.19
Ctr9Q62018 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.87□□□□□ -0.19
Ctr9Q62018 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ctr9Q62018 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ctr9Q62018 Gm14193-201ENSMUST00000105067 153 ntBASIC13.87□□□□□ -0.19
Ctr9Q62018 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ctr9Q62018 Gm11956-201ENSMUST00000119525 512 ntBASIC13.87□□□□□ -0.19
Ctr9Q62018 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.87□□□□□ -0.19
Ctr9Q62018 Gm7666-201ENSMUST00000146631 819 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms