Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Foxc1Q61572 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Foxc1Q61572 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm15236-201ENSMUST00000117309 379 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm14253-201ENSMUST00000122112 639 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm13786-201ENSMUST00000122371 333 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm6542-201ENSMUST00000153606 772 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm16296-201ENSMUST00000159905 325 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm2541-201ENSMUST00000161209 711 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Foxc1Q61572 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.02□□□□□ -0.97
Foxc1Q61572 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.02□□□□□ -0.97
Foxc1Q61572 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm26706-201ENSMUST00000180718 746 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm4819-201ENSMUST00000182170 1009 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm28934-201ENSMUST00000186491 346 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm18827-201ENSMUST00000188341 790 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Foxc1Q61572 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC9.02□□□□□ -0.97
Foxc1Q61572 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm6082-201ENSMUST00000215204 454 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm29794-201ENSMUST00000218919 1247 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm7046-201ENSMUST00000221351 977 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Mettl6-204ENSMUST00000227595 1027 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Foxc1Q61572 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm42942-201ENSMUST00000196086 1328 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Foxc1Q61572 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.02□□□□□ -0.97
Foxc1Q61572 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Foxc1Q61572 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Foxc1Q61572 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Foxc1Q61572 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
Foxc1Q61572 Rnf17-202ENSMUST00000223627 2077 ntBASIC9.01□□□□□ -0.97
Foxc1Q61572 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Foxc1Q61572 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Foxc1Q61572 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC9.01□□□□□ -0.97
Foxc1Q61572 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Foxc1Q61572 Gm42968-201ENSMUST00000198578 1372 ntBASIC9.01□□□□□ -0.97
Foxc1Q61572 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Foxc1Q61572 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.01□□□□□ -0.97
Foxc1Q61572 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Foxc1Q61572 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.01□□□□□ -0.97
Foxc1Q61572 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.01□□□□□ -0.97
Foxc1Q61572 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC9.01□□□□□ -0.97
Foxc1Q61572 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Foxc1Q61572 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Foxc1Q61572 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Foxc1Q61572 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Foxc1Q61572 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Foxc1Q61572 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Foxc1Q61572 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Foxc1Q61572 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Foxc1Q61572 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Foxc1Q61572 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Foxc1Q61572 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Foxc1Q61572 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Foxc1Q61572 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Foxc1Q61572 Gm12400-201ENSMUST00000120915 1003 ntBASIC9.01□□□□□ -0.97
Foxc1Q61572 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Foxc1Q61572 Gm12327-201ENSMUST00000121729 1168 ntBASIC9.01□□□□□ -0.97
Foxc1Q61572 Gm5863-201ENSMUST00000121760 1008 ntBASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms