Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm13263-201ENSMUST00000121271 838 ntBASIC11.84□□□□□ -0.51
Six4Q61321 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.84□□□□□ -0.51
Six4Q61321 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
Six4Q61321 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Six4Q61321 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.84□□□□□ -0.51
Six4Q61321 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.84□□□□□ -0.51
Six4Q61321 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.84□□□□□ -0.51
Six4Q61321 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.84□□□□□ -0.51
Six4Q61321 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.84□□□□□ -0.51
Six4Q61321 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.84□□□□□ -0.51
Six4Q61321 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Six4Q61321 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Six4Q61321 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.83□□□□□ -0.52
Six4Q61321 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Six4Q61321 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.83□□□□□ -0.52
Six4Q61321 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.83□□□□□ -0.52
Six4Q61321 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 Gm13916-201ENSMUST00000117368 628 ntBASIC11.83□□□□□ -0.52
Six4Q61321 Gm8731-201ENSMUST00000118088 412 ntBASIC11.83□□□□□ -0.52
Six4Q61321 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 Gm8459-201ENSMUST00000162504 760 ntBASIC11.83□□□□□ -0.52
Six4Q61321 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.83□□□□□ -0.52
Six4Q61321 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Six4Q61321 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.83□□□□□ -0.52
Six4Q61321 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 Ntng1-201ENSMUST00000051253 327 ntBASIC11.83□□□□□ -0.52
Six4Q61321 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Six4Q61321 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.83□□□□□ -0.52
Six4Q61321 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.83□□□□□ -0.52
Six4Q61321 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Six4Q61321 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.83□□□□□ -0.52
Six4Q61321 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.83□□□□□ -0.52
Six4Q61321 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.83□□□□□ -0.52
Six4Q61321 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Six4Q61321 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Six4Q61321 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.82□□□□□ -0.52
Six4Q61321 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.82□□□□□ -0.52
Six4Q61321 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Six4Q61321 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Six4Q61321 Gm13809-201ENSMUST00000117921 597 ntBASIC11.82□□□□□ -0.52
Six4Q61321 B9d1os-201ENSMUST00000137010 674 ntBASIC11.82□□□□□ -0.52
Six4Q61321 Gm23699-201ENSMUST00000158835 135 ntBASIC11.82□□□□□ -0.52
Six4Q61321 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.82□□□□□ -0.52
Six4Q61321 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.82□□□□□ -0.52
Six4Q61321 Gm1821-202ENSMUST00000227415 750 ntBASIC11.82□□□□□ -0.52
Six4Q61321 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.82□□□□□ -0.52
Six4Q61321 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.82□□□□□ -0.52
Six4Q61321 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Six4Q61321 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Six4Q61321 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.81□□□□□ -0.52
Six4Q61321 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Six4Q61321 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms