Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.29□□□□□ -0.6
Col12a1Q60847 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm13426-201ENSMUST00000117887 795 ntBASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm26119-201ENSMUST00000175601 104 ntBASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 AC116797.2-202ENSMUST00000223587 1017 ntBASIC11.29□□□□□ -0.6
Col12a1Q60847 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Col12a1Q60847 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.29□□□□□ -0.6
Col12a1Q60847 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col12a1Q60847 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.29□□□□□ -0.6
Col12a1Q60847 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC11.29□□□□□ -0.6
Col12a1Q60847 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col12a1Q60847 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.28□□□□□ -0.6
Col12a1Q60847 AC158777.1-201ENSMUST00000226216 1724 ntBASIC11.28□□□□□ -0.6
Col12a1Q60847 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col12a1Q60847 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.28□□□□□ -0.6
Col12a1Q60847 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.28□□□□□ -0.6
Col12a1Q60847 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.28□□□□□ -0.6
Col12a1Q60847 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.28□□□□□ -0.6
Col12a1Q60847 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.28□□□□□ -0.6
Col12a1Q60847 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.28□□□□□ -0.6
Col12a1Q60847 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Col12a1Q60847 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col12a1Q60847 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col12a1Q60847 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col12a1Q60847 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.28□□□□□ -0.6
Col12a1Q60847 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Col12a1Q60847 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Col12a1Q60847 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.28□□□□□ -0.6
Col12a1Q60847 Gm6794-201ENSMUST00000203829 457 ntBASIC11.28□□□□□ -0.6
Col12a1Q60847 Wbp1-209ENSMUST00000205023 716 ntBASIC11.28□□□□□ -0.6
Col12a1Q60847 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Col12a1Q60847 AC154433.1-201ENSMUST00000224401 1183 ntBASIC11.28□□□□□ -0.6
Col12a1Q60847 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.28□□□□□ -0.6
Col12a1Q60847 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Col12a1Q60847 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.28□□□□□ -0.6
Col12a1Q60847 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Col12a1Q60847 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col12a1Q60847 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.28□□□□□ -0.6
Col12a1Q60847 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col12a1Q60847 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col12a1Q60847 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.27□□□□□ -0.6
Col12a1Q60847 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col12a1Q60847 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col12a1Q60847 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.6
Col12a1Q60847 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col12a1Q60847 Gm19927-201ENSMUST00000185792 781 ntBASIC11.27□□□□□ -0.6
Col12a1Q60847 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC11.27□□□□□ -0.6
Col12a1Q60847 AC132384.2-201ENSMUST00000218018 526 ntBASIC11.27□□□□□ -0.6
Col12a1Q60847 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col12a1Q60847 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC11.27□□□□□ -0.6
Col12a1Q60847 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col12a1Q60847 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col12a1Q60847 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Col12a1Q60847 Gm9095-201ENSMUST00000117607 881 ntBASIC11.27□□□□□ -0.61
Col12a1Q60847 Gm9097-201ENSMUST00000120514 880 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms