Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Gm6458-201ENSMUST00000211573 635 ntBASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Gm807-202ENSMUST00000224929 408 ntBASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Gm5867-201ENSMUST00000063197 592 ntBASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav3-3Q5R1C3 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Gm5740-201ENSMUST00000211003 1857 ntBASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Mir686-201ENSMUST00000102174 109 ntBASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Gm13813-201ENSMUST00000120998 787 ntBASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Gm12291-201ENSMUST00000121627 311 ntBASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Gm15429-201ENSMUST00000151268 798 ntBASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Gm7730-201ENSMUST00000212486 454 ntBASIC8.81□□□□□ -1
Trav3-3Q5R1C3 AC155286.1-201ENSMUST00000218632 448 ntBASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 AC156802.2-203ENSMUST00000226032 1906 ntBASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Gm21115-201ENSMUST00000187565 2578 ntBASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Gm7103-201ENSMUST00000195642 1852 ntBASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Trav3-3Q5R1C3 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Trav3-3Q5R1C3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms