Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Gm7701-201ENSMUST00000163185 1479 ntBASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 AC158777.1-201ENSMUST00000226216 1724 ntBASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vps13aQ5H8C4 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Fam220-ps-201ENSMUST00000116535 783 ntBASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Gm14524-201ENSMUST00000121066 683 ntBASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Gm27149-201ENSMUST00000184716 1266 ntBASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Gm44882-201ENSMUST00000205702 802 ntBASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 AC192333.3-201ENSMUST00000224041 463 ntBASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Gm9701-201ENSMUST00000077976 427 ntBASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Gm14633-201ENSMUST00000121152 470 ntBASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Gm8601-201ENSMUST00000182096 909 ntBASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Gm8618-201ENSMUST00000097570 432 ntBASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.3□□□□□ -0.6
Vps13aQ5H8C4 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Gm14441-201ENSMUST00000121960 540 ntBASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Gm28937-201ENSMUST00000185413 695 ntBASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Gm29400-201ENSMUST00000187208 695 ntBASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Gm28662-201ENSMUST00000188446 695 ntBASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Gm28251-201ENSMUST00000188835 695 ntBASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Ighv5-1-201ENSMUST00000193324 353 ntBASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Gm37318-201ENSMUST00000194325 695 ntBASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Gm38017-201ENSMUST00000194768 695 ntBASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Gm37287-201ENSMUST00000195449 695 ntBASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Gm37793-201ENSMUST00000195548 695 ntBASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Gm44304-201ENSMUST00000200509 145 ntBASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Gm42732-201ENSMUST00000202887 1197 ntBASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Gm6291-201ENSMUST00000179994 309 ntBASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Gm37582-201ENSMUST00000192953 1409 ntBASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Vps13aQ5H8C4 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps13aQ5H8C4 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms