Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nlrc4Q3UP24 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nlrc4Q3UP24 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nlrc4Q3UP24 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Nlrc4Q3UP24 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
Nlrc4Q3UP24 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nlrc4Q3UP24 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nlrc4Q3UP24 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nlrc4Q3UP24 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Nlrc4Q3UP24 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Nlrc4Q3UP24 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Gm13045-201ENSMUST00000119019 712 ntBASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Mir6979-201ENSMUST00000183927 56 ntBASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Gm19353-201ENSMUST00000184561 445 ntBASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Mir8093-201ENSMUST00000185043 137 ntBASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Gm1821-202ENSMUST00000227415 750 ntBASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nlrc4Q3UP24 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Gm13809-201ENSMUST00000117921 597 ntBASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Gm11783-201ENSMUST00000119549 885 ntBASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Ntng1-201ENSMUST00000051253 327 ntBASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nlrc4Q3UP24 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms