Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Znf541Q0GGX2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Znf541Q0GGX2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Znf541Q0GGX2 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Znf541Q0GGX2 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Znf541Q0GGX2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Znf541Q0GGX2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Znf541Q0GGX2 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Znf541Q0GGX2 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Znf541Q0GGX2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Znf541Q0GGX2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Znf541Q0GGX2 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Znf541Q0GGX2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Znf541Q0GGX2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Znf541Q0GGX2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Znf541Q0GGX2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Znf541Q0GGX2 Gm42815-201ENSMUST00000198787 1470 ntBASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Gm28388-201ENSMUST00000186262 437 ntBASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Gm45206-201ENSMUST00000206885 2285 ntBASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 AC155245.1-201ENSMUST00000222266 1804 ntBASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Gm21136-201ENSMUST00000186812 2575 ntBASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Gm6605-201ENSMUST00000031488 2574 ntBASIC14.76□□□□□ -0.05
Znf541Q0GGX2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Gm43152-201ENSMUST00000202495 1638 ntBASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Gm12208-201ENSMUST00000122004 163 ntBASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Gm37826-201ENSMUST00000195329 322 ntBASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Gm43163-201ENSMUST00000196571 442 ntBASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Gm6439-201ENSMUST00000199849 862 ntBASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Gm44545-201ENSMUST00000208262 746 ntBASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Gm39288-201ENSMUST00000210554 446 ntBASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Gm6560-201ENSMUST00000198588 1591 ntBASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Gm6655-201ENSMUST00000201932 1309 ntBASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Znf541Q0GGX2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Gm14592-201ENSMUST00000117201 560 ntBASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Gm44323-201ENSMUST00000198689 129 ntBASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Gm30671-201ENSMUST00000214898 318 ntBASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.74□□□□□ -0.05
Znf541Q0GGX2 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 CT030170.2-201ENSMUST00000223267 126 ntBASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Gm37651-201ENSMUST00000194679 1494 ntBASIC14.74□□□□□ -0.05
Znf541Q0GGX2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms