Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Chd8Q09XV5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm14571-201ENSMUST00000118292 570 ntBASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm16219-201ENSMUST00000120096 274 ntBASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm13071-201ENSMUST00000122237 376 ntBASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm20091-201ENSMUST00000179683 189 ntBASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm38117-201ENSMUST00000194653 939 ntBASIC10.48□□□□□ -0.73
Chd8Q09XV5 AC134860.2-201ENSMUST00000225277 1036 ntBASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm6378-201ENSMUST00000084199 444 ntBASIC10.48□□□□□ -0.73
Chd8Q09XV5 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm4294-201ENSMUST00000105169 614 ntBASIC10.48□□□□□ -0.73
Chd8Q09XV5 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm17147-201ENSMUST00000164176 432 ntBASIC10.48□□□□□ -0.73
Chd8Q09XV5 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm2328-201ENSMUST00000193525 535 ntBASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm7504-201ENSMUST00000201449 424 ntBASIC10.48□□□□□ -0.73
Chd8Q09XV5 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd8Q09XV5 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Gm20781-201ENSMUST00000193154 693 ntBASIC10.47□□□□□ -0.73
Chd8Q09XV5 Gm21736-201ENSMUST00000195399 693 ntBASIC10.47□□□□□ -0.73
Chd8Q09XV5 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Ermard-209ENSMUST00000226561 1019 ntBASIC10.47□□□□□ -0.73
Chd8Q09XV5 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Gm15476-201ENSMUST00000118247 1191 ntBASIC10.47□□□□□ -0.73
Chd8Q09XV5 Gm8659-201ENSMUST00000120024 1084 ntBASIC10.47□□□□□ -0.73
Chd8Q09XV5 n-R5s154-201ENSMUST00000122513 108 ntBASIC10.47□□□□□ -0.73
Chd8Q09XV5 Gm37597-201ENSMUST00000191853 382 ntBASIC10.47□□□□□ -0.73
Chd8Q09XV5 Gm38349-201ENSMUST00000195732 462 ntBASIC10.47□□□□□ -0.73
Chd8Q09XV5 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Chd8Q09XV5 Gm8960-201ENSMUST00000219787 788 ntBASIC10.47□□□□□ -0.73
Chd8Q09XV5 Gm18119-201ENSMUST00000219972 616 ntBASIC10.47□□□□□ -0.73
Chd8Q09XV5 AC125223.1-201ENSMUST00000224004 749 ntBASIC10.47□□□□□ -0.73
Chd8Q09XV5 AC156561.1-201ENSMUST00000224774 233 ntBASIC10.47□□□□□ -0.73
Chd8Q09XV5 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms