Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Nkx2-3P97334 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-3P97334 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Nkx2-3P97334 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-3P97334 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-3P97334 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-3P97334 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.7□□□□□ -0.06
Nkx2-3P97334 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-3P97334 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-3P97334 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-3P97334 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-3P97334 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.69□□□□□ -0.06
Nkx2-3P97334 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Gm14807-201ENSMUST00000116640 983 ntBASIC14.69□□□□□ -0.06
Nkx2-3P97334 Gm14740-201ENSMUST00000118538 1150 ntBASIC14.69□□□□□ -0.06
Nkx2-3P97334 Gm9673-201ENSMUST00000119287 781 ntBASIC14.69□□□□□ -0.06
Nkx2-3P97334 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Gm11354-201ENSMUST00000121974 422 ntBASIC14.69□□□□□ -0.06
Nkx2-3P97334 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC14.69□□□□□ -0.06
Nkx2-3P97334 Gm18463-201ENSMUST00000207258 474 ntBASIC14.69□□□□□ -0.06
Nkx2-3P97334 Gm18460-201ENSMUST00000208088 464 ntBASIC14.69□□□□□ -0.06
Nkx2-3P97334 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Gm18065-201ENSMUST00000221395 526 ntBASIC14.69□□□□□ -0.06
Nkx2-3P97334 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-3P97334 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.68□□□□□ -0.06
Nkx2-3P97334 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.68□□□□□ -0.06
Nkx2-3P97334 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Gm12194-201ENSMUST00000117756 1012 ntBASIC14.68□□□□□ -0.06
Nkx2-3P97334 Gm11500-201ENSMUST00000118237 601 ntBASIC14.68□□□□□ -0.06
Nkx2-3P97334 Gm11700-201ENSMUST00000119409 403 ntBASIC14.68□□□□□ -0.06
Nkx2-3P97334 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Gm20414-201ENSMUST00000172918 646 ntBASIC14.68□□□□□ -0.06
Nkx2-3P97334 Gm9081-201ENSMUST00000182346 991 ntBASIC14.68□□□□□ -0.06
Nkx2-3P97334 Gm7719-201ENSMUST00000182374 975 ntBASIC14.68□□□□□ -0.06
Nkx2-3P97334 Mir7051-201ENSMUST00000184167 73 ntBASIC14.68□□□□□ -0.06
Nkx2-3P97334 Gm44323-201ENSMUST00000198689 129 ntBASIC14.68□□□□□ -0.06
Nkx2-3P97334 AC154305.2-201ENSMUST00000225813 901 ntBASIC14.68□□□□□ -0.06
Nkx2-3P97334 Gm4604-201ENSMUST00000025040 390 ntBASIC14.68□□□□□ -0.06
Nkx2-3P97334 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.68□□□□□ -0.06
Nkx2-3P97334 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-3P97334 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nkx2-3P97334 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms