Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.54□□□□□ -0.72
SgcbP82349 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
SgcbP82349 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SgcbP82349 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SgcbP82349 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SgcbP82349 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
SgcbP82349 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.53□□□□□ -0.72
SgcbP82349 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
SgcbP82349 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.53□□□□□ -0.72
SgcbP82349 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SgcbP82349 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SgcbP82349 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.53□□□□□ -0.72
SgcbP82349 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SgcbP82349 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SgcbP82349 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SgcbP82349 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SgcbP82349 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.53□□□□□ -0.72
SgcbP82349 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.53□□□□□ -0.72
SgcbP82349 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcbP82349 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.52□□□□□ -0.72
SgcbP82349 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcbP82349 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcbP82349 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SgcbP82349 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcbP82349 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.52□□□□□ -0.72
SgcbP82349 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.72
SgcbP82349 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcbP82349 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcbP82349 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.72
SgcbP82349 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcbP82349 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcbP82349 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SgcbP82349 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SgcbP82349 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
SgcbP82349 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SgcbP82349 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.52□□□□□ -0.73
SgcbP82349 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
SgcbP82349 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SgcbP82349 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
SgcbP82349 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
SgcbP82349 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
SgcbP82349 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.52□□□□□ -0.73
SgcbP82349 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
SgcbP82349 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SgcbP82349 Gm11450-201ENSMUST00000121144 333 ntBASIC10.52□□□□□ -0.73
SgcbP82349 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Gm23085-201ENSMUST00000157849 293 ntBASIC10.52□□□□□ -0.73
SgcbP82349 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.52□□□□□ -0.73
SgcbP82349 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC10.52□□□□□ -0.73
SgcbP82349 Gm25025-201ENSMUST00000175018 111 ntBASIC10.52□□□□□ -0.73
SgcbP82349 Mir5132-201ENSMUST00000175166 71 ntBASIC10.52□□□□□ -0.73
SgcbP82349 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.52□□□□□ -0.73
SgcbP82349 Gm8100-201ENSMUST00000182906 988 ntBASIC10.52□□□□□ -0.73
SgcbP82349 Mir7070-201ENSMUST00000183657 86 ntBASIC10.52□□□□□ -0.73
SgcbP82349 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
SgcbP82349 Gm2965-201ENSMUST00000198365 343 ntBASIC10.52□□□□□ -0.73
SgcbP82349 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Gm45696-201ENSMUST00000212088 985 ntBASIC10.52□□□□□ -0.73
SgcbP82349 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.52□□□□□ -0.73
SgcbP82349 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.52□□□□□ -0.73
SgcbP82349 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
SgcbP82349 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
SgcbP82349 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.52□□□□□ -0.73
SgcbP82349 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SgcbP82349 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms