Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hmgb1P63158 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.97□□□□□ -0.33
Hmgb1P63158 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.97□□□□□ -0.33
Hmgb1P63158 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Hmgb1P63158 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hmgb1P63158 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hmgb1P63158 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Gm22119-201ENSMUST00000175594 99 ntBASIC12.97□□□□□ -0.33
Hmgb1P63158 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hmgb1P63158 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hmgb1P63158 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.97□□□□□ -0.33
Hmgb1P63158 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hmgb1P63158 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.97□□□□□ -0.33
Hmgb1P63158 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.97□□□□□ -0.33
Hmgb1P63158 Gm32999-201ENSMUST00000192693 562 ntBASIC12.97□□□□□ -0.33
Hmgb1P63158 Rprl1-202ENSMUST00000198476 238 ntBASIC12.97□□□□□ -0.33
Hmgb1P63158 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.97□□□□□ -0.33
Hmgb1P63158 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.97□□□□□ -0.33
Hmgb1P63158 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.97□□□□□ -0.33
Hmgb1P63158 Gzmn-202ENSMUST00000225535 989 ntBASIC12.97□□□□□ -0.33
Hmgb1P63158 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.97□□□□□ -0.33
Hmgb1P63158 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hmgb1P63158 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.97□□□□□ -0.33
Hmgb1P63158 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.97□□□□□ -0.33
Hmgb1P63158 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hmgb1P63158 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgb1P63158 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgb1P63158 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Hmgb1P63158 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgb1P63158 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgb1P63158 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgb1P63158 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgb1P63158 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgb1P63158 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.96□□□□□ -0.33
Hmgb1P63158 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.96□□□□□ -0.33
Hmgb1P63158 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgb1P63158 Gm11660-201ENSMUST00000120955 412 ntBASIC12.96□□□□□ -0.33
Hmgb1P63158 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.96□□□□□ -0.33
Hmgb1P63158 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.96□□□□□ -0.33
Hmgb1P63158 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.96□□□□□ -0.33
Hmgb1P63158 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Hmgb1P63158 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Hmgb1P63158 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hmgb1P63158 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.96□□□□□ -0.33
Hmgb1P63158 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.96□□□□□ -0.33
Hmgb1P63158 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgb1P63158 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.96□□□□□ -0.33
Hmgb1P63158 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Hmgb1P63158 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgb1P63158 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Hmgb1P63158 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgb1P63158 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgb1P63158 Gm4454-201ENSMUST00000190585 2578 ntBASIC12.96□□□□□ -0.34
Hmgb1P63158 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hmgb1P63158 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hmgb1P63158 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hmgb1P63158 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hmgb1P63158 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Hmgb1P63158 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hmgb1P63158 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hmgb1P63158 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hmgb1P63158 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hmgb1P63158 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
Hmgb1P63158 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hmgb1P63158 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.95□□□□□ -0.34
Hmgb1P63158 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hmgb1P63158 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hmgb1P63158 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Hmgb1P63158 Gm11960-201ENSMUST00000122068 925 ntBASIC12.95□□□□□ -0.34
Hmgb1P63158 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.95□□□□□ -0.34
Hmgb1P63158 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.95□□□□□ -0.34
Hmgb1P63158 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.95□□□□□ -0.34
Hmgb1P63158 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.95□□□□□ -0.34
Hmgb1P63158 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.95□□□□□ -0.34
Hmgb1P63158 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.95□□□□□ -0.34
Hmgb1P63158 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hmgb1P63158 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms