Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.34□□□□□ -0.75
Lsm6P62313 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Lsm6P62313 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.34□□□□□ -0.75
Lsm6P62313 Gm17376-201ENSMUST00000166016 84 ntBASIC10.34□□□□□ -0.75
Lsm6P62313 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Gm8913-201ENSMUST00000209491 641 ntBASIC10.34□□□□□ -0.75
Lsm6P62313 Gm6082-201ENSMUST00000215204 454 ntBASIC10.34□□□□□ -0.75
Lsm6P62313 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Lsm6P62313 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Lsm6P62313 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Lsm6P62313 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Lsm6P62313 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Lsm6P62313 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Lsm6P62313 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Lsm6P62313 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm6P62313 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Lsm6P62313 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Lsm6P62313 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.33□□□□□ -0.76
Lsm6P62313 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Gm14130-201ENSMUST00000118417 987 ntBASIC10.33□□□□□ -0.76
Lsm6P62313 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.33□□□□□ -0.76
Lsm6P62313 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.33□□□□□ -0.76
Lsm6P62313 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.33□□□□□ -0.76
Lsm6P62313 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.33□□□□□ -0.76
Lsm6P62313 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.33□□□□□ -0.76
Lsm6P62313 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.33□□□□□ -0.76
Lsm6P62313 Gm18038-201ENSMUST00000197900 485 ntBASIC10.33□□□□□ -0.76
Lsm6P62313 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.33□□□□□ -0.76
Lsm6P62313 Gm6450-201ENSMUST00000200896 574 ntBASIC10.33□□□□□ -0.76
Lsm6P62313 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Lsm6P62313 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Lsm6P62313 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.33□□□□□ -0.76
Lsm6P62313 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Lsm6P62313 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.33□□□□□ -0.76
Lsm6P62313 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm6P62313 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.32□□□□□ -0.76
Lsm6P62313 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Lsm6P62313 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.32□□□□□ -0.76
Lsm6P62313 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm6P62313 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms