Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nup43P59235 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 Gm23085-201ENSMUST00000157849 293 ntBASIC11.11□□□□□ -0.63
Nup43P59235 Gm18734-201ENSMUST00000172937 808 ntBASIC11.11□□□□□ -0.63
Nup43P59235 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.11□□□□□ -0.63
Nup43P59235 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.11□□□□□ -0.63
Nup43P59235 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.11□□□□□ -0.63
Nup43P59235 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nup43P59235 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Nup43P59235 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.11□□□□□ -0.63
Nup43P59235 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
Nup43P59235 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.11□□□□□ -0.63
Nup43P59235 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nup43P59235 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.11□□□□□ -0.63
Nup43P59235 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup43P59235 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.1□□□□□ -0.63
Nup43P59235 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Rgr-203ENSMUST00000225070 4704 ntBASIC11.1□□□□□ -0.63
Nup43P59235 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Nup43P59235 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nup43P59235 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Nup43P59235 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.1□□□□□ -0.63
Nup43P59235 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nup43P59235 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.1□□□□□ -0.63
Nup43P59235 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Nup43P59235 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Gm24891-201ENSMUST00000104391 136 ntBASIC11.1□□□□□ -0.63
Nup43P59235 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Nup43P59235 Gm11450-201ENSMUST00000121144 333 ntBASIC11.1□□□□□ -0.63
Nup43P59235 Gm11960-201ENSMUST00000122068 925 ntBASIC11.1□□□□□ -0.63
Nup43P59235 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Nup43P59235 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.1□□□□□ -0.63
Nup43P59235 Gm8815-201ENSMUST00000173809 620 ntBASIC11.1□□□□□ -0.63
Nup43P59235 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nup43P59235 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Nup43P59235 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.1□□□□□ -0.63
Nup43P59235 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.1□□□□□ -0.63
Nup43P59235 Gm4482-201ENSMUST00000200876 742 ntBASIC11.1□□□□□ -0.63
Nup43P59235 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC11.1□□□□□ -0.63
Nup43P59235 Gm45575-201ENSMUST00000210283 548 ntBASIC11.1□□□□□ -0.63
Nup43P59235 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.1□□□□□ -0.63
Nup43P59235 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Nup43P59235 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nup43P59235 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nup43P59235 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.1□□□□□ -0.63
Nup43P59235 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.1□□□□□ -0.63
Nup43P59235 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.1□□□□□ -0.63
Nup43P59235 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nup43P59235 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.1□□□□□ -0.63
Nup43P59235 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nup43P59235 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Nup43P59235 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.09□□□□□ -0.63
Nup43P59235 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms