Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tpm2P58774 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.51□□□□□ -0.25
Tpm2P58774 Gm4984-201ENSMUST00000115987 360 ntBASIC13.51□□□□□ -0.25
Tpm2P58774 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm2P58774 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm2P58774 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.51□□□□□ -0.25
Tpm2P58774 Gm27682-201ENSMUST00000183930 110 ntBASIC13.51□□□□□ -0.25
Tpm2P58774 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.51□□□□□ -0.25
Tpm2P58774 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tpm2P58774 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.51□□□□□ -0.25
Tpm2P58774 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.51□□□□□ -0.25
Tpm2P58774 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.51□□□□□ -0.25
Tpm2P58774 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm2P58774 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tpm2P58774 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm2P58774 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm2P58774 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm2P58774 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm2P58774 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Tpm2P58774 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tpm2P58774 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm2P58774 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tpm2P58774 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm2P58774 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm2P58774 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tpm2P58774 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Tpm2P58774 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC13.5□□□□□ -0.25
Tpm2P58774 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tpm2P58774 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tpm2P58774 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tpm2P58774 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.5□□□□□ -0.25
Tpm2P58774 Gm12314-201ENSMUST00000118104 538 ntBASIC13.5□□□□□ -0.25
Tpm2P58774 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.5□□□□□ -0.25
Tpm2P58774 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.5□□□□□ -0.25
Tpm2P58774 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.5□□□□□ -0.25
Tpm2P58774 Gm23119-201ENSMUST00000158610 140 ntBASIC13.5□□□□□ -0.25
Tpm2P58774 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Gm27023-201ENSMUST00000182372 285 ntBASIC13.5□□□□□ -0.25
Tpm2P58774 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.5□□□□□ -0.25
Tpm2P58774 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tpm2P58774 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC13.5□□□□□ -0.25
Tpm2P58774 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tpm2P58774 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Tpm2P58774 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tpm2P58774 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.49□□□□□ -0.25
Tpm2P58774 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tpm2P58774 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tpm2P58774 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tpm2P58774 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Tpm2P58774 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC13.49□□□□□ -0.25
Tpm2P58774 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tpm2P58774 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Gm38192-201ENSMUST00000194364 1847 ntBASIC13.49□□□□□ -0.25
Tpm2P58774 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Gm16177-201ENSMUST00000120728 718 ntBASIC13.49□□□□□ -0.25
Tpm2P58774 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Tpm2P58774 Gm8738-201ENSMUST00000172606 329 ntBASIC13.49□□□□□ -0.25
Tpm2P58774 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.49□□□□□ -0.25
Tpm2P58774 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.49□□□□□ -0.25
Tpm2P58774 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.49□□□□□ -0.25
Tpm2P58774 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.49□□□□□ -0.25
Tpm2P58774 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Tpm2P58774 Gm5781-201ENSMUST00000219792 443 ntBASIC13.49□□□□□ -0.25
Tpm2P58774 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Gm10076-201ENSMUST00000073238 384 ntBASIC13.49□□□□□ -0.25
Tpm2P58774 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tpm2P58774 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Tpm2P58774 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms