Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Tpm1P58771 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Tpm1P58771 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Tpm1P58771 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.08□□□□□ -0.31
Tpm1P58771 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tpm1P58771 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.08□□□□□ -0.31
Tpm1P58771 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Tpm1P58771 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC13.08□□□□□ -0.32
Tpm1P58771 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Tpm1P58771 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 AC125374.1-201ENSMUST00000213573 1400 ntBASIC13.08□□□□□ -0.32
Tpm1P58771 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Tpm1P58771 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.08□□□□□ -0.32
Tpm1P58771 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC13.08□□□□□ -0.32
Tpm1P58771 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Tpm1P58771 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.08□□□□□ -0.32
Tpm1P58771 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.08□□□□□ -0.32
Tpm1P58771 Gm24548-201ENSMUST00000158650 108 ntBASIC13.08□□□□□ -0.32
Tpm1P58771 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.08□□□□□ -0.32
Tpm1P58771 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.08□□□□□ -0.32
Tpm1P58771 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.08□□□□□ -0.32
Tpm1P58771 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.08□□□□□ -0.32
Tpm1P58771 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Tpm1P58771 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.08□□□□□ -0.32
Tpm1P58771 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.08□□□□□ -0.32
Tpm1P58771 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Tpm1P58771 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tpm1P58771 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Tpm1P58771 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC13.07□□□□□ -0.32
Tpm1P58771 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Tpm1P58771 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC13.07□□□□□ -0.32
Tpm1P58771 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Tpm1P58771 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.07□□□□□ -0.32
Tpm1P58771 Gm14247-201ENSMUST00000120950 237 ntBASIC13.07□□□□□ -0.32
Tpm1P58771 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.07□□□□□ -0.32
Tpm1P58771 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.07□□□□□ -0.32
Tpm1P58771 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Gm28882-201ENSMUST00000185504 314 ntBASIC13.07□□□□□ -0.32
Tpm1P58771 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Tpm1P58771 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.07□□□□□ -0.32
Tpm1P58771 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.07□□□□□ -0.32
Tpm1P58771 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.07□□□□□ -0.32
Tpm1P58771 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.07□□□□□ -0.32
Tpm1P58771 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.07□□□□□ -0.32
Tpm1P58771 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.07□□□□□ -0.32
Tpm1P58771 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Gm43937-201ENSMUST00000204640 3122 ntBASIC13.07□□□□□ -0.32
Tpm1P58771 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Tpm1P58771 Gm37613-201ENSMUST00000195677 3580 ntBASIC13.07□□□□□ -0.32
Tpm1P58771 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tpm1P58771 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms