Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
NcanP55066 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.35□□□□□ -0.43
NcanP55066 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
NcanP55066 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.35□□□□□ -0.43
NcanP55066 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
NcanP55066 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Gm23439-201ENSMUST00000104292 132 ntBASIC12.35□□□□□ -0.43
NcanP55066 Gm6158-201ENSMUST00000109467 904 ntBASIC12.35□□□□□ -0.43
NcanP55066 Gm12389-201ENSMUST00000117696 418 ntBASIC12.35□□□□□ -0.43
NcanP55066 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC12.35□□□□□ -0.43
NcanP55066 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.35□□□□□ -0.43
NcanP55066 Gm16228-201ENSMUST00000162286 809 ntBASIC12.35□□□□□ -0.43
NcanP55066 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.35□□□□□ -0.43
NcanP55066 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.35□□□□□ -0.43
NcanP55066 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC12.35□□□□□ -0.43
NcanP55066 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.35□□□□□ -0.43
NcanP55066 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
NcanP55066 Ighv1-70-201ENSMUST00000196509 351 ntBASIC12.35□□□□□ -0.43
NcanP55066 Gm31274-201ENSMUST00000197356 229 ntBASIC12.35□□□□□ -0.43
NcanP55066 Gm44323-201ENSMUST00000198689 129 ntBASIC12.35□□□□□ -0.43
NcanP55066 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
NcanP55066 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
NcanP55066 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.35□□□□□ -0.43
NcanP55066 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
NcanP55066 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.35□□□□□ -0.43
NcanP55066 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
NcanP55066 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
NcanP55066 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.34□□□□□ -0.43
NcanP55066 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
NcanP55066 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
NcanP55066 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.34□□□□□ -0.43
NcanP55066 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.34□□□□□ -0.43
NcanP55066 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
NcanP55066 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.34□□□□□ -0.43
NcanP55066 Gm14227-201ENSMUST00000119431 629 ntBASIC12.34□□□□□ -0.43
NcanP55066 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Gm26047-201ENSMUST00000157308 113 ntBASIC12.34□□□□□ -0.43
NcanP55066 Gm7765-201ENSMUST00000182585 974 ntBASIC12.34□□□□□ -0.43
NcanP55066 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.34□□□□□ -0.43
NcanP55066 Ighv5-1-201ENSMUST00000193324 353 ntBASIC12.34□□□□□ -0.43
NcanP55066 Gm26047-202ENSMUST00000198840 115 ntBASIC12.34□□□□□ -0.43
NcanP55066 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Gm4903-201ENSMUST00000210462 405 ntBASIC12.34□□□□□ -0.43
NcanP55066 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
NcanP55066 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
NcanP55066 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.34□□□□□ -0.43
NcanP55066 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
NcanP55066 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
NcanP55066 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
NcanP55066 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NcanP55066 AC158777.1-201ENSMUST00000226216 1724 ntBASIC12.34□□□□□ -0.43
NcanP55066 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.34□□□□□ -0.43
NcanP55066 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.34□□□□□ -0.43
NcanP55066 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.34□□□□□ -0.43
NcanP55066 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NcanP55066 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
NcanP55066 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms