Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ClgnP52194 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClgnP52194 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClgnP52194 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClgnP52194 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClgnP52194 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ClgnP52194 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClgnP52194 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClgnP52194 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.06□□□□□ -0.48
ClgnP52194 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.06□□□□□ -0.48
ClgnP52194 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClgnP52194 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClgnP52194 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClgnP52194 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClgnP52194 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClgnP52194 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClgnP52194 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ClgnP52194 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
ClgnP52194 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClgnP52194 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.05□□□□□ -0.48
ClgnP52194 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.05□□□□□ -0.48
ClgnP52194 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClgnP52194 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.05□□□□□ -0.48
ClgnP52194 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ClgnP52194 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ClgnP52194 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClgnP52194 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.05□□□□□ -0.48
ClgnP52194 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
ClgnP52194 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
ClgnP52194 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ClgnP52194 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.05□□□□□ -0.48
ClgnP52194 Gm14723-201ENSMUST00000118686 215 ntBASIC12.05□□□□□ -0.48
ClgnP52194 Gm6963-201ENSMUST00000147879 379 ntBASIC12.05□□□□□ -0.48
ClgnP52194 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.05□□□□□ -0.48
ClgnP52194 Gm27320-201ENSMUST00000184892 109 ntBASIC12.05□□□□□ -0.48
ClgnP52194 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.05□□□□□ -0.48
ClgnP52194 Gm32999-201ENSMUST00000192693 562 ntBASIC12.05□□□□□ -0.48
ClgnP52194 Gm43758-201ENSMUST00000199500 367 ntBASIC12.05□□□□□ -0.48
ClgnP52194 Gm7783-201ENSMUST00000204795 781 ntBASIC12.05□□□□□ -0.48
ClgnP52194 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.05□□□□□ -0.48
ClgnP52194 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.05□□□□□ -0.48
ClgnP52194 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.05□□□□□ -0.48
ClgnP52194 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.05□□□□□ -0.48
ClgnP52194 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.05□□□□□ -0.48
ClgnP52194 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.05□□□□□ -0.48
ClgnP52194 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClgnP52194 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ClgnP52194 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClgnP52194 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ClgnP52194 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ClgnP52194 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.05□□□□□ -0.48
ClgnP52194 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ClgnP52194 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClgnP52194 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ClgnP52194 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClgnP52194 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.05□□□□□ -0.48
ClgnP52194 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ClgnP52194 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ClgnP52194 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClgnP52194 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ClgnP52194 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClgnP52194 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.05□□□□□ -0.48
ClgnP52194 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
ClgnP52194 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
ClgnP52194 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ClgnP52194 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ClgnP52194 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.04□□□□□ -0.48
ClgnP52194 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
ClgnP52194 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.04□□□□□ -0.48
ClgnP52194 Gm15610-201ENSMUST00000120584 195 ntBASIC12.04□□□□□ -0.48
ClgnP52194 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.04□□□□□ -0.48
ClgnP52194 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.04□□□□□ -0.48
ClgnP52194 Gm25668-201ENSMUST00000157700 129 ntBASIC12.04□□□□□ -0.48
ClgnP52194 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.04□□□□□ -0.48
ClgnP52194 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.04□□□□□ -0.48
ClgnP52194 Gm6334-201ENSMUST00000207083 228 ntBASIC12.04□□□□□ -0.48
ClgnP52194 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.04□□□□□ -0.48
ClgnP52194 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
ClgnP52194 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ClgnP52194 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.04□□□□□ -0.48
ClgnP52194 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms