Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LtbrP50284 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LtbrP50284 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.97□□□□□ -0.17
LtbrP50284 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LtbrP50284 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LtbrP50284 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LtbrP50284 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LtbrP50284 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LtbrP50284 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LtbrP50284 Gm37863-201ENSMUST00000194911 1457 ntBASIC13.97□□□□□ -0.17
LtbrP50284 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.97□□□□□ -0.17
LtbrP50284 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LtbrP50284 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.97□□□□□ -0.17
LtbrP50284 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.97□□□□□ -0.17
LtbrP50284 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LtbrP50284 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LtbrP50284 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
LtbrP50284 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LtbrP50284 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.97□□□□□ -0.17
LtbrP50284 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.97□□□□□ -0.17
LtbrP50284 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LtbrP50284 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LtbrP50284 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LtbrP50284 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LtbrP50284 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LtbrP50284 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
LtbrP50284 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LtbrP50284 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.96□□□□□ -0.17
LtbrP50284 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
LtbrP50284 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LtbrP50284 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.96□□□□□ -0.17
LtbrP50284 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.96□□□□□ -0.17
LtbrP50284 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Gm5434-202ENSMUST00000222384 1451 ntBASIC13.96□□□□□ -0.17
LtbrP50284 Gm5434-201ENSMUST00000071825 1451 ntBASIC13.96□□□□□ -0.17
LtbrP50284 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.96□□□□□ -0.17
LtbrP50284 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.96□□□□□ -0.17
LtbrP50284 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.96□□□□□ -0.17
LtbrP50284 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC13.96□□□□□ -0.17
LtbrP50284 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LtbrP50284 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC13.96□□□□□ -0.17
LtbrP50284 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Gm23119-201ENSMUST00000158610 140 ntBASIC13.96□□□□□ -0.17
LtbrP50284 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LtbrP50284 Mir6407-201ENSMUST00000184510 101 ntBASIC13.96□□□□□ -0.17
LtbrP50284 Gm28180-201ENSMUST00000189608 722 ntBASIC13.96□□□□□ -0.17
LtbrP50284 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC13.96□□□□□ -0.17
LtbrP50284 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LtbrP50284 AC153968.2-201ENSMUST00000215579 1140 ntBASIC13.96□□□□□ -0.17
LtbrP50284 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.96□□□□□ -0.17
LtbrP50284 Gm23680-201ENSMUST00000083162 164 ntBASIC13.96□□□□□ -0.17
LtbrP50284 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LtbrP50284 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
LtbrP50284 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LtbrP50284 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.96□□□□□ -0.18
LtbrP50284 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.96□□□□□ -0.18
LtbrP50284 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
LtbrP50284 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
LtbrP50284 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC13.96□□□□□ -0.18
LtbrP50284 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LtbrP50284 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LtbrP50284 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LtbrP50284 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LtbrP50284 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LtbrP50284 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LtbrP50284 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LtbrP50284 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LtbrP50284 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LtbrP50284 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LtbrP50284 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.95□□□□□ -0.18
LtbrP50284 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LtbrP50284 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LtbrP50284 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LtbrP50284 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LtbrP50284 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LtbrP50284 Gm14942-201ENSMUST00000119642 336 ntBASIC13.95□□□□□ -0.18
LtbrP50284 Gm15061-201ENSMUST00000121076 1046 ntBASIC13.95□□□□□ -0.18
LtbrP50284 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC13.95□□□□□ -0.18
LtbrP50284 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LtbrP50284 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.95□□□□□ -0.18
LtbrP50284 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC13.95□□□□□ -0.18
LtbrP50284 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.95□□□□□ -0.18
LtbrP50284 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LtbrP50284 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LtbrP50284 Gm29499-201ENSMUST00000189151 486 ntBASIC13.95□□□□□ -0.18
LtbrP50284 Gm28329-201ENSMUST00000191208 689 ntBASIC13.95□□□□□ -0.18
LtbrP50284 Gm29171-201ENSMUST00000191397 486 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms