Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm14109-201ENSMUST00000118814 309 ntBASIC11.94□□□□□ -0.5
Vps4bP46467 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.94□□□□□ -0.5
Vps4bP46467 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Vps4bP46467 Gm9192-201ENSMUST00000183221 985 ntBASIC11.94□□□□□ -0.5
Vps4bP46467 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.94□□□□□ -0.5
Vps4bP46467 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Gm8420-201ENSMUST00000097103 598 ntBASIC11.94□□□□□ -0.5
Vps4bP46467 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vps4bP46467 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.94□□□□□ -0.5
Vps4bP46467 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Vps4bP46467 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.93□□□□□ -0.5
Vps4bP46467 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Vps4bP46467 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Vps4bP46467 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Vps4bP46467 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Vps4bP46467 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.93□□□□□ -0.5
Vps4bP46467 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.93□□□□□ -0.5
Vps4bP46467 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Vps4bP46467 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.93□□□□□ -0.5
Vps4bP46467 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.93□□□□□ -0.5
Vps4bP46467 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps4bP46467 Gm43002-201ENSMUST00000200310 155 ntBASIC11.93□□□□□ -0.5
Vps4bP46467 Gm4607-201ENSMUST00000206649 577 ntBASIC11.93□□□□□ -0.5
Vps4bP46467 Gm45598-202ENSMUST00000210719 986 ntBASIC11.93□□□□□ -0.5
Vps4bP46467 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Vps4bP46467 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Vps4bP46467 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps4bP46467 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps4bP46467 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps4bP46467 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Vps4bP46467 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.92□□□□□ -0.5
Vps4bP46467 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vps4bP46467 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps4bP46467 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps4bP46467 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps4bP46467 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps4bP46467 Gm16505-201ENSMUST00000179981 232 ntBASIC11.92□□□□□ -0.5
Vps4bP46467 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps4bP46467 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.92□□□□□ -0.5
Vps4bP46467 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vps4bP46467 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Vps4bP46467 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vps4bP46467 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.92□□□□□ -0.5
Vps4bP46467 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps4bP46467 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms