Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Sox5P35710 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sox5P35710 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.8□□□□□ -0.36
Sox5P35710 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Gm23270-201ENSMUST00000104055 131 ntBASIC12.8□□□□□ -0.36
Sox5P35710 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.8□□□□□ -0.36
Sox5P35710 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.8□□□□□ -0.36
Sox5P35710 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.8□□□□□ -0.36
Sox5P35710 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.8□□□□□ -0.36
Sox5P35710 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.8□□□□□ -0.36
Sox5P35710 Gm807-202ENSMUST00000224929 408 ntBASIC12.8□□□□□ -0.36
Sox5P35710 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sox5P35710 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Sox5P35710 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox5P35710 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.79□□□□□ -0.36
Sox5P35710 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sox5P35710 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Sox5P35710 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Sox5P35710 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Sox5P35710 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Sox5P35710 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.79□□□□□ -0.36
Sox5P35710 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.79□□□□□ -0.36
Sox5P35710 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sox5P35710 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sox5P35710 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.79□□□□□ -0.36
Sox5P35710 Gm3096-201ENSMUST00000185770 364 ntBASIC12.79□□□□□ -0.36
Sox5P35710 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.79□□□□□ -0.36
Sox5P35710 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sox5P35710 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.79□□□□□ -0.36
Sox5P35710 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.79□□□□□ -0.36
Sox5P35710 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox5P35710 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox5P35710 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Sox5P35710 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox5P35710 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox5P35710 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox5P35710 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox5P35710 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.78□□□□□ -0.36
Sox5P35710 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox5P35710 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox5P35710 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox5P35710 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.78□□□□□ -0.36
Sox5P35710 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox5P35710 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox5P35710 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox5P35710 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox5P35710 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.78□□□□□ -0.36
Sox5P35710 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox5P35710 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox5P35710 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox5P35710 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox5P35710 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms